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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
total RNA-seq
20
single cell RNA-seq
16
snATAC-seq
11
ATAC-seq
1
Hi-C
Assay category
69
Transcription
27
DNA accessibility
1
3D chromatin structure
Date released
64
August, 2021
19
April, 2020
14
May, 2023
Available data
64
bed narrowPeak
xls
57
txt
1
hic
Organism
96
Homo sapiens
Biosample type
97
tissue
Organ
78
kidney
19
lung
Project
78
AMP
19
LungMap
Genome assembly (visualization)
11
GRCh38
1
hg19
Lab
3912
AMP-T2D consortium
343
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
78
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
files.file_type!
xls
BIOSAMPLE
ASSAY
97 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
ATAC-seq
Hi-C
tissue
kidney
49
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11
1
lung
9
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