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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
49
ATAC-seq
3
Hi-C
Assay category
53
Transcription
49
DNA accessibility
DNA methylation
3
3D chromatin structure
Date released
39
May, 2022
37
February, 2023
19
September, 2020
7
August, 2020
3
October, 2022
Available data
63
fastq
39
zippedFastqFolder
10
bigWig
3
bedpe bed3+
3
cool
3
hic
Organism
105
Homo sapiens
Biosample type
105
primary cell
Organ
105
epithelium
105
pancreas
Project
105
HPAP
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
360
AMP-T2D consortium
105
Klaus Kaestner, Upenn
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
audit script error
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
105 results
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total RNA-seq
ATAC-seq
Hi-C
primary cell
pancreatic alpha cell
42
29
1
pancreatic beta cell
11
16
1
pancreatic acinar cell
4
1
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