Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
85
single cell RNA-seq
49
ATAC-seq
48
snATAC-seq
47
WGBS
Assay category
97
DNA accessibility
85
Transcription
47
DNA methylation
Date released
134
May, 2022
45
February, 2021
43
September, 2020
7
August, 2020
Available data
153
zippedFastqFolder
77
fastq
10
bigWig
6
tsv
3
bedpe bed3+
cool
3
hic
Organism
229
Homo sapiens
Biosample type
229
primary cell
Organ
96
epithelium
96
pancreas
Project
229
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
2665
AMP-T2D consortium
229
Klaus Kaestner, Upenn
228
Kyle Gaulton, UCSD
93
Katalin Susztak, Upenn
47
KPMP
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
27
audit script error
assay_title!
total RNA-seq
files.file_type!
cool
BIOSAMPLE
ASSAY
229 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ATAC-seq
snATAC-seq
WGBS
primary cell
Langerhans cell
85
48
pancreatic alpha cell
29
31
pancreatic beta cell
16
16
pancreatic acinar cell
4
Download