Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
85
single cell RNA-seq
48
snATAC-seq
47
WGBS
39
ATAC-seq
Assay category
87
DNA accessibility
85
Transcription
47
DNA methylation
Date released
134
May, 2022
45
February, 2021
40
September, 2020
Available data
153
zippedFastqFolder
77
fastq
bigWig
6
tsv
3
bedpe bed3+
cool
3
hic
Organism
219
Homo sapiens
Biosample type
219
primary cell
Organ
86
epithelium
86
pancreas
Project
219
HPAP
Lab
992
AMP-T2D consortium
219
Klaus Kaestner, Upenn
106
Kyle Gaulton, UCSD
93
Katalin Susztak, Upenn
47
KPMP
19
Xin Sun, UCSD
14
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
2
Struan F.A. Grant, CHOP
1
ITG
1
Maike Sander, UCSD
Audit category:
27
audit script error
assay_title!
total RNA-seq
files.file_type!
cool
bigWig
BIOSAMPLE
ASSAY
219 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
snATAC-seq
WGBS
ATAC-seq
primary cell
Langerhans cell
85
48
pancreatic alpha cell
31
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
Download