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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
49
ATAC-seq
48
snATAC-seq
47
WGBS
3
Hi-C
Assay category
48
DNA accessibility
3
3D chromatin structure
Date released
27
February, 2021
21
May, 2022
3
October, 2022
Available data
27
fastq
21
zippedFastqFolder
3
bedpe bed3+
3
cool
3
hic
Organism
51
Homo sapiens
Biosample type
51
primary cell
Organ
3
epithelium
3
pancreas
Project
51
HPAP
Genome assembly (visualization)
3
hg19
Lab
51
Klaus Kaestner, Upenn
28
AMP-T2D consortium
18
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
7
Katalin Susztak, Upenn
3
Bing Ren, UCSD
1
ITG
Audit category:
30
audit script error
BIOSAMPLE
ASSAY
51 results
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snATAC-seq
Hi-C
primary cell
Langerhans cell
48
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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