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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
49
ATAC-seq
48
snATAC-seq
41
WGBS
Assay category
177
Transcription
97
DNA accessibility
41
DNA methylation
Date released
134
May, 2022
76
February, 2023
59
September, 2020
39
February, 2021
7
August, 2020
Available data
169
fastq
153
zippedFastqFolder
10
bigWig
tsv
Organism
315
Homo sapiens
Biosample type
315
primary cell
Organ
143
epithelium
143
pancreas
Project
315
HPAP
Genome assembly (visualization)
10
GRCh38
hg19
Lab
805
AMP-T2D consortium
315
Klaus Kaestner, Upenn
141
Katalin Susztak, Upenn
105
Kyle Gaulton, UCSD
47
KPMP
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
11
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
1
ITG
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
27
audit script error
assembly!
hg19
files.file_type!
tsv
BIOSAMPLE
ASSAY
315 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
snATAC-seq
WGBS
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
29
25
pancreatic beta cell
11
16
16
exocrine cell
39
pancreatic acinar cell
4
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