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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
34
single cell RNA-seq
27
snATAC-seq
6
WGBS
1
ATAC-seq
Assay category
126
Transcription
28
DNA accessibility
6
DNA methylation
Date released
76
February, 2023
45
February, 2021
38
September, 2020
1
March, 2019
Available data
160
fastq
153
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
cool
3
hic
1
bam
1
bed broadPeak
Organism
160
Homo sapiens
Biosample type
159
primary cell
1
tissue
Organ
60
pancreas
59
epithelium
Project
159
HPAP
1
AMP
Genome assembly (visualization)
GRCh38
Lab
223
AMP-T2D consortium
159
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
Audit category:
27
audit script error
assembly!
GRCh38
BIOSAMPLE
ASSAY
160 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
WGBS
ATAC-seq
primary cell
Langerhans cell
34
27
pancreatic alpha cell
42
6
exocrine cell
39
pancreatic beta cell
11
tissue
islet of Langerhans
1
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