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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
total RNA-seq
85
single cell RNA-seq
50
ATAC-seq
48
snATAC-seq
47
WGBS
18
ChIP-seq
6
Hi-C
5
STARR-seq
whole genome sequencing assay
Assay category
6
3D chromatin structure
Date released
3
October, 2022
2
August, 2021
1
March, 2019
Available data
5
bedpe bed3+
5
hic
3
cool
1
bedpe
Organism
6
Homo sapiens
Biosample type
3
primary cell
2
tissue
1
cell line
Organ
5
pancreas
3
epithelium
1
liver
Project
3
AMP
3
HPAP
Genome assembly (visualization)
5
hg19
Lab
26
AMP-T2D consortium
3
Bing Ren, UCSD
3
Klaus Kaestner, Upenn
1
ITG
1
Katalin Susztak, Upenn
Audit category:
3
audit script error
assay_title!
whole genome sequencing assay
BIOSAMPLE
ASSAY
6 results
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Hi-C
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
islet of Langerhans
2
cell line
HepG2
1
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