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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
33
single cell RNA-seq
21
snATAC-seq
10
MeRIP-seq
Assay category
60
DNA accessibility
41
DNA methylation
33
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
134
May, 2022
76
February, 2023
59
September, 2020
45
February, 2021
10
November, 2020
7
August, 2020
3
October, 2022
Available data
134
zippedFastqFolder
Organism
144
Homo sapiens
Biosample type
134
primary cell
6
cell line
4
tissue
Organ
90
pancreas
86
epithelium
Project
134
HPAP
10
AMP
Lab
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
8
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
144 results
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WGBS
ATAC-seq
single cell RNA-seq
snATAC-seq
MeRIP-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
cell line
EndoC_BH1
6
tissue
islet of Langerhans
4
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