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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ATAC-seq
snATAC-seq
Assay category
292
Transcription
154
DNA binding
83
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
57
May, 2022
11
February, 2023
7
August, 2020
5
May, 2021
3
September, 2020
Available data
39
zippedFastqFolder
28
fastq
18
bam
18
bed narrowPeak
15
bigWig
Organism
83
Homo sapiens
Biosample type
49
primary cell
29
tissue
5
in vitro differentiated cells
Organ
78
pancreas
49
epithelium
Project
49
HPAP
23
AMP
11
T1D
Genome assembly (visualization)
23
hg19
10
GRCh38
Lab
560
AMP-T2D consortium
75
Katalin Susztak, Upenn
49
Klaus Kaestner, Upenn
34
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
5
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
83 results
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ATAC-seq
primary cell
pancreatic alpha cell
29
pancreatic beta cell
16
pancreatic acinar cell
4
tissue
islet of Langerhans
29
in vitro differentiated cells
embryonic stem cell
5
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