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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ATAC-seq
18
snATAC-seq
Assay category
154
DNA binding
115
Transcription
57
DNA accessibility
Date released
18
May, 2022
16
February, 2023
16
January, 2021
5
May, 2021
2
August, 2021
Available data
22
bed narrowPeak
18
bam
18
fastq
10
bigWig
3
bed bedgraph
3
txt
Organism
57
Homo sapiens
Biosample type
39
tissue
10
in vitro differentiated cells
8
primary cell
Organ
39
pancreas
8
blood
8
bodily fluid
2
connective tissue
Project
29
T1D
28
AMP
Genome assembly (visualization)
28
hg19
Lab
562
AMP-T2D consortium
97
Klaus Kaestner, Upenn
81
Katalin Susztak, Upenn
52
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
10
Xin Sun, UCSD
5
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
57 results
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ATAC-seq
snATAC-seq
tissue
islet of Langerhans
29
6
pancreas
4
in vitro differentiated cells
embryonic stem cell
6
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
primary cell
peripheral blood mononuclear cell
8
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