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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
29
ATAC-seq
18
snATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
56
Transcription
Date released
May, 2021
45
May, 2020
6
May, 2022
5
February, 2023
Available data
51
bam
45
bigWig
45
tsv
6
fastq
6
txt
Organism
56
Homo sapiens
Biosample type
45
primary cell
11
tissue
Organ
11
pancreas
Project
50
T1D
6
AMP
Genome assembly (visualization)
45
GRCh38
45
hg19
Lab
1124
AMP-T2D consortium
92
Klaus Kaestner, Upenn
56
Kyle Gaulton, UCSD
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
10
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
month_released!
May, 2021
BIOSAMPLE
ASSAY
56 results
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total RNA-seq
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
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tissue
islet of Langerhans
11
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