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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ATAC-seq
12
total RNA-seq
10
snATAC-seq
1
pCHi-C
Assay category
40
DNA accessibility
12
Transcription
Date released
24
May, 2022
18
February, 2023
8
January, 2021
2
May, 2021
1
October, 2017
Available data
25
fastq
24
bam
18
bed narrowPeak
6
txt
1
bed broadPeak
1
bigWig
Organism
53
Homo sapiens
Biosample type
239
primary cell
53
tissue
47
in vitro differentiated cells
5
cell line
Organ
52
pancreas
1
thymus
Project
27
T1D
26
AMP
Genome assembly (visualization)
19
hg19
1
GRCh38
Lab
2425
AMP-T2D consortium
142
Katalin Susztak, Upenn
52
Kyle Gaulton, UCSD
47
KPMP
40
Karen Mohlke, UNC
19
Xin Sun, UCSD
4
Bing Ren, UCSD
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
BIOSAMPLE
ASSAY
53 results
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ATAC-seq
total RNA-seq
snATAC-seq
pCHi-C
tissue
islet of Langerhans
30
11
6
pancreas
1
4
thymus
1
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