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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
23
ATAC-seq
8
total RNA-seq
Assay category
70
DNA binding
23
DNA accessibility
8
Transcription
Target of assay
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
83
May, 2021
18
May, 2022
Available data
48
bed narrowPeak
40
bigWig
24
bam
24
fastq
txt
2
bed bed3+
Organism
101
Homo sapiens
Biosample type
47
in vitro differentiated cells
35
primary cell
19
tissue
Organ
19
pancreas
Project
236
T1D
101
AMP
Genome assembly (visualization)
58
hg19
Lab
3809
AMP-T2D consortium
101
Kyle Gaulton, UCSD
85
Katalin Susztak, Upenn
40
Karen Mohlke, UNC
38
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
files.file_type!
txt
BIOSAMPLE
ASSAY
101 results
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ChIP-seq
ATAC-seq
total RNA-seq
in vitro differentiated cells
embryonic stem cell
37
5
5
primary cell
CD8-positive, alpha-beta T cell
33
2
tissue
islet of Langerhans
18
pancreas
1
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