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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
59
total RNA-seq
17
pCHi-C
5
ATAC-seq
Assay category
59
Transcription
5
DNA accessibility
Date released
81
May, 2021
45
May, 2020
24
May, 2022
23
February, 2023
16
January, 2021
Available data
58
bigWig
51
bam
51
tsv
2
bed bed3+
Organism
81
Homo sapiens
Biosample type
69
primary cell
10
in vitro differentiated cells
2
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
1
pancreas
1
thymus
Project
68
T1D
13
AMP
Genome assembly (visualization)
58
hg19
51
GRCh38
Lab
153
AMP-T2D consortium
81
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
81 results
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total RNA-seq
pCHi-C
ATAC-seq
primary cell
monocyte
51
1
CD8-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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in vitro differentiated cells
embryonic stem cell
5
5
tissue
pancreas
1
thymus
1
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