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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
65
total RNA-seq
23
ATAC-seq
17
pCHi-C
Assay category
154
DNA binding
65
Transcription
23
DNA accessibility
Target of assay
134
histone
134
histone modification
74
broad histone mark
60
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
235
May, 2021
45
May, 2020
24
May, 2022
23
February, 2023
16
January, 2021
Available data
175
bigWig
159
bam
132
bed narrowPeak
84
tagAlign
51
tsv
24
fastq
6
txt
2
bed bed3+
Organism
259
Homo sapiens
Biosample type
186
primary cell
47
in vitro differentiated cells
26
tissue
Organ
25
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
152
T1D
107
AMP
Genome assembly (visualization)
193
hg19
135
GRCh38
Lab
259
Kyle Gaulton, UCSD
166
AMP-T2D consortium
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
259 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
primary cell
monocyte
84
51
1
CD8-positive, alpha-beta T cell
33
2
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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in vitro differentiated cells
embryonic stem cell
37
5
5
tissue
islet of Langerhans
6
18
pancreas
1
thymus
1
See all biosamples
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