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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
103
total RNA-seq
17
pCHi-C
8
snATAC-seq
5
ATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
103
Transcription
Date released
58
May, 2021
45
May, 2020
Available data
98
bigWig
96
bam
96
tsv
2
bed bed3+
Organism
103
Homo sapiens
Biosample type
98
primary cell
5
in vitro differentiated cells
Organ
pancreas
Project
96
T1D
7
AMP
Genome assembly (visualization)
98
hg19
96
GRCh38
Lab
910
AMP-T2D consortium
103
Kyle Gaulton, UCSD
49
Katalin Susztak, Upenn
39
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
9
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
organ_slims!
pancreas
BIOSAMPLE
ASSAY
103 results
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total RNA-seq
primary cell
monocyte
53
CD8-positive, alpha-beta T cell
4
B cell
2
T follicular helper cell
2
T-helper 1 cell
2
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in vitro differentiated cells
embryonic stem cell
5
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