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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
58
single cell RNA-seq
49
total RNA-seq
6
snATAC-seq
1
Hi-C
Assay category
107
Transcription
83
DNA accessibility
1
3D chromatin structure
Date released
128
August, 2021
47
September, 2023
14
May, 2023
2
March, 2019
Available data
64
bed narrowPeak
64
xls
57
txt
1
bam
1
bed broadPeak
1
fastq
1
hic
Organism
191
Homo sapiens
Biosample type
191
tissue
Organ
189
kidney
2
pancreas
Project
144
AMP
47
KPMP
Genome assembly (visualization)
76
GRCh38
2
hg19
Lab
3912
AMP-T2D consortium
343
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
BIOSAMPLE
ASSAY
191 results
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ATAC-seq
single cell RNA-seq
total RNA-seq
snATAC-seq
Hi-C
tissue
kidney
75
58
49
6
1
islet of Langerhans
2
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