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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
12
total RNA-seq
10
MeRIP-seq
10
snATAC-seq
Assay category
39
DNA accessibility
12
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
24
May, 2022
18
February, 2023
10
November, 2020
8
January, 2021
1
May, 2021
Available data
24
bam
24
fastq
18
bed narrowPeak
6
txt
Organism
61
Homo sapiens
Biosample type
55
tissue
6
cell line
Organ
61
pancreas
8
blood
8
bodily fluid
6
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
35
AMP
26
T1D
Genome assembly (visualization)
18
hg19
Lab
725
AMP-T2D consortium
152
Klaus Kaestner, Upenn
51
Kyle Gaulton, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
61 results
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ATAC-seq
total RNA-seq
MeRIP-seq
snATAC-seq
tissue
islet of Langerhans
29
11
4
6
pancreas
1
4
cell line
EndoC_BH1
6
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