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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
21
total RNA-seq
2
Hi-C
Assay category
22
DNA accessibility
21
Transcription
2
3D chromatin structure
Date released
40
May, 2022
2
August, 2021
2
March, 2019
1
October, 2017
Available data
21
bigWig
20
bed narrowPeak
1
bed broadPeak
1
bedpe
1
bedpe bed3+
1
fastq
1
hic
1
tsv
Organism
45
Homo sapiens
Biosample type
45
tissue
cell line
Organ
40
liver
5
pancreas
Project
45
AMP
Genome assembly (visualization)
23
hg19
2
GRCh38
Lab
3297
AMP-T2D consortium
338
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
19
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Bing Ren, UCSD
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
biosample_type!
cell line
BIOSAMPLE
ASSAY
45 results
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ATAC-seq
total RNA-seq
Hi-C
tissue
liver
20
20
islet of Langerhans
2
1
2
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