Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
98
total RNA-seq
24
ATAC-seq
Assay category
117
DNA binding
98
Transcription
24
DNA accessibility
Target of assay
114
histone
114
histone modification
64
broad histone mark
50
narrow histone mark
3
control
Date released
175
May, 2021
45
May, 2020
18
May, 2022
1
October, 2017
Available data
221
bigWig
198
bam
132
bed narrowPeak
96
tsv
84
tagAlign
19
fastq
2
bed bed3+
1
bed broadPeak
Organism
239
Homo sapiens
Biosample type
215
primary cell
19
tissue
5
in vitro differentiated cells
Organ
19
pancreas
Project
180
T1D
59
AMP
Genome assembly (visualization)
239
hg19
181
GRCh38
Lab
2925
AMP-T2D consortium
238
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
17
Bing Ren, UCSD
7
Struan F.A. Grant, CHOP
3
Klaus Kaestner, Upenn
1
Katalin Susztak, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
239 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
monocyte
84
53
CD8-positive, alpha-beta T cell
33
4
B cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 20 more…
tissue
islet of Langerhans
19
in vitro differentiated cells
embryonic stem cell
5
See all biosamples
Download