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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
24
ATAC-seq
14
total RNA-seq
Assay category
70
DNA binding
24
DNA accessibility
14
Transcription
Target of assay
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
83
May, 2021
24
May, 2022
1
October, 2017
Available data
48
bed narrowPeak
41
bigWig
25
fastq
24
bam
6
txt
2
bed bed3+
1
bed broadPeak
Organism
108
Homo sapiens
Biosample type
47
in vitro differentiated cells
35
primary cell
26
tissue
Organ
26
pancreas
Project
T1D
108
AMP
Genome assembly (visualization)
59
hg19
1
GRCh38
Lab
3904
AMP-T2D consortium
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
107
Kyle Gaulton, UCSD
47
KPMP
40
Karen Mohlke, UNC
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
award.project!
T1D
BIOSAMPLE
ASSAY
108 results
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ChIP-seq
ATAC-seq
total RNA-seq
in vitro differentiated cells
embryonic stem cell
37
5
5
primary cell
CD8-positive, alpha-beta T cell
33
2
tissue
islet of Langerhans
19
6
pancreas
1
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