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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
snATAC-seq
12
total RNA-seq
9
single cell RNA-seq
1
pCHi-C
Assay category
29
DNA accessibility
21
Transcription
Date released
24
May, 2022
16
February, 2023
9
April, 2020
2
May, 2021
Available data
24
bam
24
fastq
18
bed narrowPeak
6
txt
Organism
51
Homo sapiens
Biosample type
231
primary cell
51
tissue
47
in vitro differentiated cells
5
cell line
Organ
41
pancreas
9
lung
1
thymus
Project
25
AMP
17
T1D
9
LungMap
Genome assembly (visualization)
18
hg19
Lab
2423
AMP-T2D consortium
136
Katalin Susztak, Upenn
47
KPMP
42
Kyle Gaulton, UCSD
40
Karen Mohlke, UNC
9
Xin Sun, UCSD
4
Bing Ren, UCSD
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
51 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
pCHi-C
tissue
islet of Langerhans
29
11
lung
9
pancreas
1
thymus
1
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