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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
snATAC-seq
5
ATAC-seq
4
MeRIP-seq
2
Capture-C
Assay category
Transcription
5
DNA accessibility
Target of assay
2
control
2
nucleotide modification
Date released
4
August, 2021
4
November, 2020
3
February, 2023
Available data
5
bigWig
4
bed narrowPeak
3
bed bedgraph
3
txt
2
bed bed3+
Organism
11
Homo sapiens
Biosample type
7
in vitro differentiated cells
4
tissue
Organ
10
pancreas
epithelium
4
connective tissue
Project
11
AMP
Genome assembly (visualization)
7
hg19
Lab
2216
AMP-T2D consortium
210
Kyle Gaulton, UCSD
76
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
7
Struan F.A. Grant, CHOP
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
0
Xin Sun, UCSD
Audit category:
1
inconsistent ontology term
assay_slims!
Transcription
assay_title!
snATAC-seq
organ_slims!
epithelium
BIOSAMPLE
ASSAY
11 results
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ATAC-seq
MeRIP-seq
Capture-C
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
tissue
islet of Langerhans
4
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