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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
snATAC-seq
10
ATAC-seq
6
WGBS
3
Hi-C
Assay category
Transcription
47
DNA accessibility
6
DNA methylation
3
3D chromatin structure
Date released
May, 2022
33
February, 2021
10
April, 2020
7
August, 2020
3
October, 2022
3
September, 2020
Available data
43
fastq
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
55
Homo sapiens
Biosample type
46
primary cell
10
tissue
Organ
19
epithelium
19
pancreas
10
lung
Project
46
HPAP
10
LungMap
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
2435
AMP-T2D consortium
Kyle Gaulton, UCSD
82
Katalin Susztak, Upenn
46
Klaus Kaestner, Upenn
28
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
30
audit script error
assay_slims!
Transcription
lab.title!
Kyle Gaulton, UCSD
month_released!
May, 2022
BIOSAMPLE
ASSAY
56 results
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snATAC-seq
ATAC-seq
WGBS
Hi-C
primary cell
Langerhans cell
27
pancreatic alpha cell
7
6
1
pancreatic beta cell
3
1
pancreatic acinar cell
1
tissue
lung
10
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