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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
snATAC-seq
47
WGBS
42
ATAC-seq
3
Hi-C
Assay category
Transcription
100
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
101
May, 2022
33
February, 2021
10
April, 2020
August, 2020
3
October, 2022
3
September, 2020
Available data
101
zippedFastqFolder
36
fastq
6
tsv
3
bedpe bed3+
3
bigWig
3
cool
3
hic
Organism
149
Homo sapiens
Biosample type
140
primary cell
10
tissue
Organ
92
epithelium
92
pancreas
10
lung
Project
140
HPAP
10
LungMap
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
2436
AMP-T2D consortium
228
Kyle Gaulton, UCSD
140
Klaus Kaestner, Upenn
82
Katalin Susztak, Upenn
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
30
audit script error
assay_slims!
Transcription
lab.title!
Struan F.A. Grant, CHOP
month_released!
August, 2020
BIOSAMPLE
ASSAY
150 results
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snATAC-seq
WGBS
ATAC-seq
Hi-C
primary cell
pancreatic alpha cell
31
24
1
Langerhans cell
48
pancreatic beta cell
16
14
1
pancreatic acinar cell
4
1
tissue
lung
10
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