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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
23
ATAC-seq
Assay category
70
DNA binding
23
DNA accessibility
Transcription
Target of assay
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
75
May, 2021
18
May, 2022
Available data
48
bed narrowPeak
38
bigWig
18
bam
18
fastq
Organism
93
Homo sapiens
Biosample type
42
in vitro differentiated cells
33
primary cell
18
tissue
Organ
18
pancreas
Project
135
T1D
93
AMP
10
LungMap
Genome assembly (visualization)
56
hg19
Lab
2432
AMP-T2D consortium
93
Kyle Gaulton, UCSD
82
Katalin Susztak, Upenn
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
0
Xin Sun, UCSD
assay_slims!
Transcription
BIOSAMPLE
ASSAY
93 results
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ChIP-seq
ATAC-seq
in vitro differentiated cells
embryonic stem cell
37
5
primary cell
CD8-positive, alpha-beta T cell
33
tissue
islet of Langerhans
18
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