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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
snATAC-seq
8
ATAC-seq
2
Capture-C
Assay category
8
DNA accessibility
Date released
3
February, 2023
2
August, 2021
2
March, 2019
1
October, 2017
Available data
6
bigWig
4
bed narrowPeak
3
bed bedgraph
3
txt
2
bed broadPeak
2
fastq
1
bam
Organism
8
Homo sapiens
Biosample type
5
in vitro differentiated cells
3
tissue
Organ
3
pancreas
2
connective tissue
Project
8
AMP
Genome assembly (visualization)
7
hg19
2
GRCh38
Lab
343
AMP-T2D consortium
75
Katalin Susztak, Upenn
49
Klaus Kaestner, Upenn
34
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
5
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
1
Stephen Parker, UMich
0
Xin Sun, UCSD
Audit category:
1
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
8 results
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ATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
tissue
islet of Langerhans
3
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