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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
13
ATAC-seq
1
Hi-C
Assay category
Transcription
29
DNA accessibility
1
3D chromatin structure
Date released
11
May, 2023
10
April, 2020
7
August, 2021
2
March, 2019
Available data
bed narrowPeak
64
xls
1
bam
1
bed broadPeak
1
fastq
1
hic
Organism
29
Homo sapiens
Biosample type
30
tissue
Organ
18
kidney
10
lung
2
pancreas
Project
20
AMP
10
LungMap
Genome assembly (visualization)
12
GRCh38
2
hg19
Lab
893
AMP-T2D consortium
147
Klaus Kaestner, Upenn
96
Kyle Gaulton, UCSD
18
Katalin Susztak, Upenn
14
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
3
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
assay_slims!
Transcription
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
30 results
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snATAC-seq
ATAC-seq
Hi-C
tissue
kidney
6
11
1
lung
10
islet of Langerhans
2
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