Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
16
snATAC-seq
1
Hi-C
Assay category
93
DNA accessibility
Transcription
1
3D chromatin structure
Date released
71
August, 2021
11
May, 2023
10
April, 2020
2
March, 2019
Available data
64
bed narrowPeak
64
xls
1
bam
1
bed broadPeak
1
fastq
1
hic
Organism
93
Homo sapiens
Biosample type
94
tissue
Organ
82
kidney
10
lung
2
pancreas
Project
84
AMP
10
LungMap
Genome assembly (visualization)
76
GRCh38
2
hg19
Lab
2436
AMP-T2D consortium
228
Kyle Gaulton, UCSD
147
Klaus Kaestner, Upenn
82
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
assay_slims!
Transcription
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
94 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
snATAC-seq
Hi-C
tissue
kidney
75
6
1
lung
10
islet of Langerhans
2
Download