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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
snATAC-seq
5
ATAC-seq
2
Capture-C
Assay category
15
DNA accessibility
Transcription
Date released
10
April, 2020
4
August, 2021
3
February, 2023
Available data
5
bigWig
4
bed narrowPeak
3
bed bedgraph
3
txt
2
bed bed3+
Organism
16
Homo sapiens
Biosample type
10
tissue
7
in vitro differentiated cells
Organ
10
lung
4
connective tissue
Project
10
LungMap
7
AMP
Genome assembly (visualization)
7
hg19
Lab
AMP-T2D consortium
228
Kyle Gaulton, UCSD
147
Klaus Kaestner, Upenn
82
Katalin Susztak, Upenn
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
assay_slims!
Transcription
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
17 results
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snATAC-seq
ATAC-seq
Capture-C
tissue
lung
10
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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