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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
20
snATAC-seq
12
total RNA-seq
9
single cell RNA-seq
1
pCHi-C
Assay category
49
DNA accessibility
21
Transcription
Date released
24
May, 2022
19
April, 2020
18
February, 2023
8
January, 2021
2
May, 2021
Available data
24
bam
24
fastq
18
bed narrowPeak
6
txt
Organism
70
Homo sapiens
Biosample type
239
primary cell
71
tissue
47
in vitro differentiated cells
5
cell line
Organ
51
pancreas
19
lung
1
thymus
Project
27
T1D
25
AMP
19
LungMap
Genome assembly (visualization)
18
hg19
Lab
2425
AMP-T2D consortium
142
Katalin Susztak, Upenn
52
Kyle Gaulton, UCSD
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
19
Xin Sun, UCSD
4
Bing Ren, UCSD
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Mark McCarthy, Oxford
Maike Sander, UCSD
1
Stephen Parker, UMich
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
71 results
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ATAC-seq
snATAC-seq
total RNA-seq
single cell RNA-seq
pCHi-C
tissue
islet of Langerhans
29
6
11
lung
10
9
pancreas
4
1
thymus
1
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