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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
23
ATAC-seq
14
total RNA-seq
10
snATAC-seq
9
single cell RNA-seq
Assay category
70
DNA binding
33
DNA accessibility
23
Transcription
Target of assay
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
83
May, 2021
24
May, 2022
19
April, 2020
Available data
48
bed narrowPeak
40
bigWig
24
bam
24
fastq
6
txt
2
bed bed3+
Organism
125
Homo sapiens
Biosample type
47
in vitro differentiated cells
44
tissue
35
primary cell
Organ
25
pancreas
19
lung
Project
T1D
107
AMP
19
LungMap
Genome assembly (visualization)
58
hg19
Lab
AMP-T2D consortium
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
107
Kyle Gaulton, UCSD
47
KPMP
40
Karen Mohlke, UNC
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
lab.title!
AMP-T2D consortium
award.project!
T1D
BIOSAMPLE
ASSAY
126 results
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ChIP-seq
ATAC-seq
total RNA-seq
snATAC-seq
single cell RNA-seq
in vitro differentiated cells
embryonic stem cell
37
5
5
tissue
islet of Langerhans
18
6
lung
10
9
pancreas
1
primary cell
CD8-positive, alpha-beta T cell
33
2
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