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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
10
snATAC-seq
9
single cell RNA-seq
5
ATAC-seq
2
Capture-C
Assay category
15
DNA accessibility
9
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
19
April, 2020
10
November, 2020
4
August, 2021
3
February, 2023
Available data
5
bigWig
4
bed narrowPeak
3
bed bedgraph
3
txt
2
bed bed3+
Organism
35
Homo sapiens
Biosample type
23
tissue
7
in vitro differentiated cells
6
cell line
Organ
19
lung
10
pancreas
6
epithelium
4
connective tissue
Project
19
LungMap
17
AMP
Genome assembly (visualization)
7
hg19
Lab
3912
AMP-T2D consortium
343
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
7
inconsistent ontology term
lab.title!
Bing Ren, UCSD
Anna Gloyn, Oxford
BIOSAMPLE
ASSAY
36 results
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MeRIP-seq
snATAC-seq
single cell RNA-seq
ATAC-seq
Capture-C
tissue
lung
10
9
islet of Langerhans
4
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
EndoC_BH1
6
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