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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
snATAC-seq
49
ATAC-seq
47
WGBS
3
Hi-C
Assay category
Transcription
107
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
101
May, 2022
33
February, 2021
10
April, 2020
7
August, 2020
3
October, 2022
3
September, 2020
Available data
101
zippedFastqFolder
43
fastq
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
156
Homo sapiens
Biosample type
147
primary cell
10
tissue
Organ
99
epithelium
99
pancreas
10
lung
Project
147
HPAP
10
LungMap
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
2436
AMP-T2D consortium
228
Kyle Gaulton, UCSD
147
Klaus Kaestner, Upenn
82
Katalin Susztak, Upenn
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
Stephen Parker, UMich
Audit category:
30
audit script error
lab.title!
Bing Ren, UCSD
Stephen Parker, UMich
assay_slims!
Transcription
BIOSAMPLE
ASSAY
157 results
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snATAC-seq
ATAC-seq
WGBS
Hi-C
primary cell
pancreatic alpha cell
29
31
1
Langerhans cell
48
pancreatic beta cell
16
16
1
pancreatic acinar cell
4
1
tissue
lung
10
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