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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
49
total RNA-seq
20
single cell RNA-seq
snATAC-seq
1
Hi-C
Assay category
77
DNA accessibility
69
Transcription
1
3D chromatin structure
Date released
122
August, 2021
14
May, 2023
9
April, 2020
2
March, 2019
Available data
64
bed narrowPeak
64
xls
57
txt
1
bam
1
bed broadPeak
1
fastq
1
hic
Organism
147
Homo sapiens
Biosample type
147
tissue
Organ
136
kidney
9
lung
2
pancreas
Project
138
AMP
9
LungMap
Genome assembly (visualization)
76
GRCh38
2
hg19
Lab
3910
AMP-T2D consortium
325
Kyle Gaulton, UCSD
276
Klaus Kaestner, Upenn
136
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
9
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
lab.title!
Bing Ren, UCSD
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
147 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
Hi-C
tissue
kidney
75
49
11
1
lung
9
islet of Langerhans
2
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