Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
49
total RNA-seq
single cell RNA-seq
16
snATAC-seq
1
Hi-C
Assay category
93
DNA accessibility
49
Transcription
1
3D chromatin structure
Date released
120
August, 2021
11
May, 2023
10
April, 2020
2
March, 2019
Available data
64
bed narrowPeak
64
xls
49
txt
1
bam
1
bed broadPeak
1
fastq
1
hic
Organism
142
Homo sapiens
Biosample type
143
tissue
Organ
131
kidney
10
lung
2
pancreas
Project
133
AMP
10
LungMap
Genome assembly (visualization)
76
GRCh38
2
hg19
Lab
3701
AMP-T2D consortium
343
Kyle Gaulton, UCSD
239
Klaus Kaestner, Upenn
131
Katalin Susztak, Upenn
40
Karen Mohlke, UNC
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
lab.title!
Bing Ren, UCSD
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
143 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
snATAC-seq
Hi-C
tissue
kidney
75
49
6
1
lung
10
islet of Langerhans
2
Download