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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
total RNA-seq
20
single cell RNA-seq
16
snATAC-seq
13
ATAC-seq
1
Hi-C
Assay category
69
Transcription
29
DNA accessibility
1
3D chromatin structure
Date released
64
August, 2021
19
April, 2020
14
May, 2023
2
March, 2019
Available data
bed narrowPeak
64
xls
57
txt
1
bam
1
bed broadPeak
1
fastq
1
hic
Organism
98
Homo sapiens
Biosample type
99
tissue
Organ
78
kidney
19
lung
2
pancreas
Project
80
AMP
19
LungMap
Genome assembly (visualization)
12
GRCh38
2
hg19
Lab
2369
AMP-T2D consortium
324
Klaus Kaestner, Upenn
211
Kyle Gaulton, UCSD
78
Katalin Susztak, Upenn
47
KPMP
Bing Ren, UCSD
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
3
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
lab.title!
Bing Ren, UCSD
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
99 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
ATAC-seq
Hi-C
tissue
kidney
49
11
6
11
1
lung
9
10
islet of Langerhans
2
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