Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
total RNA-seq
84
ChIP-seq
1
ATAC-seq
Assay category
96
Transcription
84
DNA binding
1
DNA accessibility
Target of assay
84
histone
84
histone modification
44
broad histone mark
40
narrow histone mark
Date released
135
May, 2021
45
May, 2020
1
March, 2019
Available data
180
bam
180
bigWig
96
tsv
84
bed narrowPeak
84
tagAlign
Organism
181
Homo sapiens
Biosample type
180
primary cell
1
tissue
Organ
1
pancreas
Project
180
T1D
1
AMP
Genome assembly (visualization)
239
hg19
181
GRCh38
Lab
2818
AMP-T2D consortium
180
Kyle Gaulton, UCSD
75
Katalin Susztak, Upenn
10
Klaus Kaestner, Upenn
Bing Ren, UCSD
1
ITG
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
0
Xin Sun, UCSD
Audit category:
4
inconsistent ontology term
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
181 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte
53
84
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 20 more…
tissue
islet of Langerhans
1
See all biosamples
Download