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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
snATAC-seq
9
single cell RNA-seq
5
ATAC-seq
Assay category
15
DNA accessibility
9
Transcription
Date released
19
April, 2020
3
February, 2023
2
March, 2019
Available data
3
bed bedgraph
3
bigWig
3
txt
2
bed narrowPeak
1
bam
1
bed broadPeak
1
fastq
Organism
23
Homo sapiens
Biosample type
21
tissue
3
in vitro differentiated cells
Organ
19
lung
connective tissue
2
pancreas
Project
19
LungMap
5
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
3233
AMP-T2D consortium
342
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
3
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
lab.title!
Bing Ren, UCSD
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
24 results
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snATAC-seq
single cell RNA-seq
ATAC-seq
tissue
lung
10
9
islet of Langerhans
2
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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