Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
109
total RNA-seq
9
single cell RNA-seq
Assay category
154
DNA binding
118
Transcription
44
DNA accessibility
Target of assay
134
histone
134
histone modification
74
broad histone mark
60
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
213
May, 2021
45
May, 2020
9
April, 2020
May, 2022
5
February, 2023
Available data
215
bigWig
180
bam
114
bed narrowPeak
96
tsv
84
tagAlign
2
bed bed3+
Organism
272
Homo sapiens
Biosample type
215
primary cell
42
in vitro differentiated cells
15
tissue
Organ
9
lung
6
pancreas
Project
185
T1D
78
AMP
9
LungMap
Genome assembly (visualization)
215
hg19
180
GRCh38
Lab
3134
AMP-T2D consortium
263
Kyle Gaulton, UCSD
144
Klaus Kaestner, Upenn
60
Katalin Susztak, Upenn
47
KPMP
40
Patrick T. Ellinor, Broad
28
Bing Ren, UCSD
9
Xin Sun, UCSD
4
Anna Gloyn, Oxford
Audit category:
4
inconsistent ontology term
month_released!
May, 2022
BIOSAMPLE
ASSAY
272 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
primary cell
monocyte
84
53
CD8-positive, alpha-beta T cell
33
4
B cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 20 more…
in vitro differentiated cells
embryonic stem cell
37
5
tissue
lung
9
islet of Langerhans
5
pancreas
1
See all biosamples
Download