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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
98
total RNA-seq
3
Hi-C
Assay category
117
DNA binding
98
Transcription
3
3D chromatin structure
Target of assay
114
histone
114
histone modification
64
broad histone mark
50
narrow histone mark
3
control
Date released
170
May, 2021
45
May, 2020
3
October, 2022
Available data
215
bigWig
180
bam
114
bed narrowPeak
96
tsv
84
tagAlign
3
bedpe bed3+
3
cool
3
hic
2
bed bed3+
Organism
218
Homo sapiens
Biosample type
218
primary cell
18
tissue
5
in vitro differentiated cells
Organ
3
epithelium
3
pancreas
Project
180
T1D
35
AMP
3
HPAP
Genome assembly (visualization)
218
hg19
190
GRCh38
Lab
410
AMP-T2D consortium
215
Kyle Gaulton, UCSD
3
Klaus Kaestner, Upenn
0
Xin Sun, UCSD
Audit category:
4
inconsistent ontology term
3
audit script error
BIOSAMPLE
ASSAY
218 results
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ChIP-seq
total RNA-seq
Hi-C
primary cell
monocyte
84
53
CD8-positive, alpha-beta T cell
33
4
B cell
2
T follicular helper cell
2
T-helper 1 cell
2
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