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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
102
total RNA-seq
18
ATAC-seq
Assay category
114
DNA binding
102
Transcription
18
DNA accessibility
Target of assay
114
histone
114
histone modification
64
broad histone mark
50
narrow histone mark
Date released
165
May, 2021
45
May, 2020
24
May, 2022
Available data
220
bigWig
204
bam
132
bed narrowPeak
96
tsv
84
tagAlign
24
fastq
6
txt
2
bed bed3+
Organism
234
Homo sapiens
Biosample type
210
primary cell
24
tissue
Organ
24
pancreas
Project
180
T1D
54
AMP
Genome assembly (visualization)
228
hg19
180
GRCh38
Lab
3272
AMP-T2D consortium
234
Kyle Gaulton, UCSD
64
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
14
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
1
Mark McCarthy, Oxford
0
Xin Sun, UCSD
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
234 results
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ChIP-seq
total RNA-seq
ATAC-seq
primary cell
monocyte
84
53
CD8-positive, alpha-beta T cell
30
2
B cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 20 more…
tissue
islet of Langerhans
6
18
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