Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ATAC-seq
18
snATAC-seq
9
single cell RNA-seq
7
total RNA-seq
1
pCHi-C
Assay category
36
DNA accessibility
16
Transcription
Date released
24
May, 2022
19
April, 2020
February, 2023
8
January, 2021
2
May, 2021
Available data
24
bam
24
fastq
18
bed narrowPeak
6
txt
Organism
52
Homo sapiens
Biosample type
239
primary cell
53
tissue
47
in vitro differentiated cells
Organ
33
pancreas
19
lung
1
thymus
Project
25
AMP
19
LungMap
9
T1D
Genome assembly (visualization)
18
hg19
Lab
2348
AMP-T2D consortium
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
34
Kyle Gaulton, UCSD
19
Xin Sun, UCSD
4
Bing Ren, UCSD
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
month_released!
February, 2023
BIOSAMPLE
ASSAY
53 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
snATAC-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
islet of Langerhans
18
4
6
lung
10
9
pancreas
4
1
thymus
1
Download