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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
10
snATAC-seq
9
single cell RNA-seq
8
total RNA-seq
5
ATAC-seq
Assay category
70
DNA binding
17
Transcription
15
DNA accessibility
Target of assay
50
histone
50
histone modification
30
broad histone mark
20
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
83
May, 2021
May, 2022
19
April, 2020
Available data
40
bigWig
30
bed narrowPeak
2
bed bed3+
Organism
101
Homo sapiens
Biosample type
47
in vitro differentiated cells
35
primary cell
20
tissue
Organ
19
lung
1
pancreas
Project
T1D
83
AMP
19
LungMap
Genome assembly (visualization)
40
hg19
Lab
3902
AMP-T2D consortium
190
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
83
Kyle Gaulton, UCSD
47
KPMP
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
month_released!
May, 2022
award.project!
T1D
BIOSAMPLE
ASSAY
102 results
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ChIP-seq
snATAC-seq
single cell RNA-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
embryonic stem cell
37
5
5
primary cell
CD8-positive, alpha-beta T cell
33
2
tissue
lung
10
9
pancreas
1
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