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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
ChIP-seq
59
total RNA-seq
17
pCHi-C
5
ATAC-seq
Assay category
146
DNA binding
59
Transcription
5
DNA accessibility
Target of assay
134
histone
134
histone modification
74
broad histone mark
60
narrow histone mark
12
transcription factor
control
5
RNA binding protein
Date released
227
May, 2021
45
May, 2020
24
May, 2022
23
February, 2023
19
April, 2020
16
January, 2021
Available data
172
bigWig
135
bam
114
bed narrowPeak
84
tagAlign
51
tsv
2
bed bed3+
Organism
227
Homo sapiens
Biosample type
183
primary cell
42
in vitro differentiated cells
2
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
1
pancreas
1
thymus
Project
152
T1D
75
AMP
Genome assembly (visualization)
172
hg19
135
GRCh38
Lab
227
Kyle Gaulton, UCSD
163
AMP-T2D consortium
0
Xin Sun, UCSD
Audit category:
1
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
227 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
ATAC-seq
primary cell
monocyte
84
51
1
CD8-positive, alpha-beta T cell
30
2
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
+ See 10 more…
in vitro differentiated cells
embryonic stem cell
32
5
5
tissue
pancreas
1
thymus
1
See all biosamples
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