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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
total RNA-seq
80
ChIP-seq
34
ATAC-seq
28
snATAC-seq
17
pCHi-C
9
single cell RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
80
DNA binding
Target of assay
134
histone
134
histone modification
broad histone mark
60
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
80
May, 2021
Available data
53
bigWig
50
bed narrowPeak
40
bam
40
tagAlign
Organism
80
Homo sapiens
Biosample type
53
primary cell
27
in vitro differentiated cells
Project
40
AMP
40
T1D
Genome assembly (visualization)
53
hg19
40
GRCh38
Lab
1253
AMP-T2D consortium
80
Kyle Gaulton, UCSD
17
Bing Ren, UCSD
0
Xin Sun, UCSD
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
primary cell
monocyte
40
CD8-positive, alpha-beta T cell
13
in vitro differentiated cells
embryonic stem cell
27
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