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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
469
ChIP-seq
79
total RNA-seq
10
ATAC-seq
6
pCHi-C
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
Hi-C
2
HiChIP
1
DNase-seq
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
10
DNA accessibility
Date released
9
February, 2021
1
January, 2018
Available data
9
bam
9
bed narrowPeak
1
bed bed3
1
bigWig
Organism
10
Homo sapiens
Biosample type
248
tissue
128
primary cell
42
in vitro differentiated cells
10
cell line
Organ
epithelium
19
pancreas
8
artery
8
blood vessel
8
heart
8
vasculature
1
blood
1
bodily fluid
1
liver
Project
10
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
1
inconsistent replicate
month_released!
April, 2018
organ_slims!
epithelium
BIOSAMPLE
ASSAY
10 results
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ATAC-seq
cell line
smooth muscle cell of the coronary artery
8
GM12878
1
HepG2
1
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