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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
Assay category
65
DNA binding
Target of assay
65
histone
65
histone modification
33
narrow histone mark
33
transcription factor
31
broad histone mark
22
control
6
RNA binding protein
3
chromatin remodeller
Date released
25
August, 2017
24
December, 2017
16
February, 2018
Available data
79
bam
78
bed narrowPeak
78
bigWig
65
fastq
26
tagAlign
12
bigBed narrowPeak
8
bed bed3+
Organism
65
Homo sapiens
Biosample type
74
tissue
73
primary cell
65
in vitro differentiated cells
16
cell line
2
stem cell
Organ
25
connective tissue
14
epithelium
12
embryo
12
liver
Project
65
AMP
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
65
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
month_released!
April, 2019
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
in vitro differentiated cells
adipocyte
25
hepatocyte
12
pancreatic endoderm
10
definitive endodermal cell
4
primitive gut cell
4
Hepatic endoderm
2
Posterior foregut
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
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