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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
6
ATAC-seq
4
Hi-C
3
total RNA-seq
Assay category
18
DNA binding
6
DNA accessibility
4
3D chromatin structure
3
Transcription
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
17
October, 2019
6
February, 2021
4
July, 2019
3
February, 2020
1
May, 2019
Available data
114
bam
92
bed narrowPeak
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
31
Homo sapiens
Biosample type
31
tissue
Organ
208
kidney
156
heart
127
pancreas
100
bone element
96
liver
66
connective tissue
65
adipose tissue
63
blood vessel
63
brain
63
vasculature
53
eye
46
artery
31
limb
25
musculature of body
20
lung
16
skeleton
15
epithelium
12
nerve
9
spleen
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
31
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
31
AMP-T2D consortium
month_released!
March, 2019
files.file_type!
bigWig
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
tissue
tibial nerve
11
1
tibial artery
5
1
gastrocnemius medialis
4
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
islet of Langerhans
1
muscle of leg
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
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